BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034D07LP1|AL429893
(909 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1205 1621 0.0
>3x_Contig1205
Length = 5507
Score = 1621 bits (817), Expect = 0.0
Identities = 824/827 (99%)
Strand = Plus / Plus
Query: 1 atcatgaaaaggaaaagagcagaacgacaattaccacgtaaatgcaagaatgggtatggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4681 atcatgaaaaggaaaagagcagaacgacaattaccacgtaaatgcaagaatgggtatggt 4740
Query: 61 aatagatacaaaattaatgggaagattaggaatggttcaattagatgggaaaacaagtcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4741 aatagatacaaaattaatgggaagattaggaatggttcaattagatgggaaaacaagtcc 4800
Query: 121 aattttcgtttttttattcgtttctgaatagaataatagattaaaggaatagaaacgata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4801 aattttcgtttttttattcgtttctgaatagaataatagattaaaggaatagaaacgata 4860
Query: 181 acgaatggtaataaaggcaggtaaatcgaatttaaacaagaaaaacaaaaacaaaacaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4861 acgaatggtaataaaggcaggtaaatcgaatttaaacaagaaaaacaaaaacaaaacaac 4920
Query: 241 gaataggagatggagtaggtttaaagagtaatattcttagtgggaaaggtaactttagcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4921 gaataggagatggagtaggtttaaagagtaatattcttagtgggaaaggtaactttagcg 4980
Query: 301 tagaaaaacaatctatcaaaattaaagttcagaggttcaatctttgaggaatcctccaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4981 tagaaaaacaatctatcaaaattaaagttcagaggttcaatctttgaggaatcctccaac 5040
Query: 361 ttcggcataccaaaagatccattcatctagaaaggccttgaacatccaccacaatccaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5041 ttcggcataccaaaagatccattcatctagaaaggccttgaacatccaccacaatccaaa 5100
Query: 421 attttcgtttgagttcgttaatatttctttcgtacaagcagcggtgaaagaattgaaagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5101 attttcgtttgagttcgttaatatttctttcgtacaagcagcggtgaaagaattgaaagt 5160
Query: 481 caatactagtaatctaggaggtagactcttgtttgaragcactccgaaaaccattttaac 540
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 5161 caatactagtaatctaggaggtagactcttgtttgaaagcactccgaaaaccattttaac 5220
Query: 541 gaaagagattagatcaaaatcctcatccgttttcttaagaagttccaataactgcactga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5221 gaaagagattagatcaaaatcctcatccgttttcttaagaagttccaataactgcactga 5280
Query: 601 aaagagttcttgcatatctttttctaaagcagggtggttgaagtaagagaactcttggtt 660
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 5281 aaagagttcttgcatatctttttctaaagcagggtggttgaagtaagaaaactcttggtt 5340
Query: 661 tattagttcggacactttaacgttctgttcccagacgtataacattgataatctattctc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5341 tattagttcggacactttaacgttctgttcccagacgtataacattgataatctattctc 5400
Query: 721 ttgcttactcatgatatttgataatttcttgctgttgtcaatcactttcacgagcctttt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5401 ttgcttactcatgatatttgataatttcttgctgttgtcaatcactttcacgagcctttt 5460
Query: 781 cacaagacggcaaaacgcctgtgccacactctttttgaaggttacca 827
|||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 5461 cacaagacggcaaaacgcctgtgccacactctttttgacggttacca 5507
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8683
Number of Sequences: 1807
Number of extensions: 8683
Number of successful extensions: 84
Number of sequences better than 1.0e-20: 1
length of query: 909
length of database: 10,358,551
effective HSP length: 16
effective length of query: 893
effective length of database: 10,329,639
effective search space: 9224367627
effective search space used: 9224367627
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)